Combination Drug Diagnostics: Fueling Growth of Personalized Medicine

Published: April 2010
No. of Pages: 130
  

Report Description:

The focus of this report is on drug/diagnostic combinations -- drugs used to treat patients, and on
diagnostic tests that can provide information about how a patient may respond to treatment with that drug.Personalized medicine has emerged as an important field for companies in both the pharmaceutical and diagnostic industries. While many drugs in development and on the market today still follow the traditional approach where drugs are developed to treat all patients with a certain disease or condition, the “one-size fits all” approach, it is now widely recognized that not all drugs work equally well in all patients. Also, some percentage of patients experience adverse reactions, sometimes severe, to drugs while other patients experience few or no side effects.
Many different factors can affect how a patient responds to a particular drug. These factors can include the genetic makeup of the patient, genetic changes that occur with diseases such as cancer, as well as diet, age, environmental factors. Considerable interest exists in the identification of methods to determine which patients will respond well to a particular therapy and which patients are likely not to benefit from therapy as well as which patients are likely to experience adverse side effects caused the therapy. This interest is leading the advancement of personalized medicine. “Personalized medicine” is a broad term that is defined somewhat differently by different groups.

Chapter 2 discusses various definitions of “personalized medicine” as well as different definitions for terms such as pharmacogenomics, pharmacogenetics, and other terms used in personalized medicine. Chapter 2 also briefly discusses the wide range of disease applications in which personalized medicine can be used, and technologies used in personalized medicine tests.

Chapter 3 discusses many examples of drug/diagnostic combinations currently available today for use in personalized medicine. Some combinations, such as testing for HER2 over expression in breast cancer before treating the patient with Herceptin, have been available for a number of years and are now widely used. Other examples of available drug/diagnostic combinations discussed in Chapter 3, but are not necessarily widely used at this time. The largest number of personalized medicine tests are available for oncology drugs, although personalized medicine is already being applied to many different disease indications. Extensive tables in Chapter 3 provide information on diagnostic companies that market personalized medicine in vitro diagnostic (IVD) tests and/or test services through their CLIA laboratories.

Chapter 4 highlights some aspects of the development of diagnostic and therapeutic products that apply to the filed of personalized medicine, but not necessarily to all diagnostic tests and drugs in development. This includes identification of biomarkers and validation of personalized medicine tests. Validation includes analytical validation, clinical validation, and validation of clinical utility or benefit. In addition, development and regulatory issues facing both therapeutic and diagnostic companies are discussed. Chapter 4 concludes with a section that discusses certain specific personalized medicine tests and why they either are, or are not, widely used at this time.
As with all emerging and rapidly changing fields, companies participating in this field face a number of different strategic issues. This is especially true for personalized medicine, where companies from two different market segments (diagnostics and pharmaceuticals) are both participating and must interact with each other.

Selected strategic issues discussed in Chapter 5 include the need for more research and basic knowledge, models and options for pharmaceutical companies developing the drugs in drug/diagnostic combinations, models and options for diagnostic companies developing the tests in drug/diagnostic combinations, options for diagnostic companies for delivery of these tests, a number of aspects of health economics and reimbursement, intellectual property issues, and certain critical issues facing companies as they try to penetrate the market with newly developed personalized medicine products.

Company perspectives on this market are discussed in Chapter 6. Today, personalized medicine is a rapidly growing field with many pharmaceutical and diagnostic companies actively participating. As with personalized medicine drug/diagnostic combinations available today, the greatest focus of activity is in the field of oncology. Many different products in development programs for oncology are discussed in Chapter 7.

In addition, Chapter 7 discusses personalized medicine products in R&D directed to a wide range of other disease indications. These indications include autism, autoimmune disease, cardiovascular disease, CNS disorders, HIV infection, osteoarthritis, osteoporosis, pain, type-2 diabetes, and others. A number of pharmaceutical companies are now interested in personalized medicine. Since many of these companies do not have internal diagnostic divisions (or internal capabilities to develop and market diagnostic tests), this has led to a number of agreements between pharmaceutical and diagnostic companies.

These agreements are discussed in the final section of Chapter 7, and 35 agreements are listed in Table 7-3. Of these, 14 agreements were made or announced in 2009, and another 4 agreements have been announced to date in 2010. It is likely that even more pharmaceutical/diagnostic company agreements have occurred recently. This activity demonstrates that companion diagnostics is a topic of interest to at least some pharmaceutical and biopharmaceutical companies.

The final chapter of this report, Chapter 8, includes interviews with executives at both pharmaceutical and diagnostic companies that are actively participating in personalized medicine. These experts in personalized medicine discuss the activities of their companies, the overall field of personalized medicine, and many of the issues facing companies in this field.

Combination Drug Diagnostics: Fueling Growth of Personalized Medicine

CHAPTER 1
INTRODUCTION

CHAPTER 2
OVERVIEW OF PERSONALIZED MEDICINE

2.1 What is Personalized Medicine?  What are Drug/Diagnostic Combinations?

  • Drug/Diagnostic Combinations

2.2 Selected Terms Used in Personalized Medicine

  • Pharmacogenomics
  • Pharmacogenetics
  • Other Terms Used in Personalized Medicine

2.3 Disease Applications in Personalized Medicine
2.4 Diagnostic Technologies Used in Personalized Medicine

CHAPTER 3
SELECTED EXAMPLES OF PERSONALIZED MEDICINE AVAILABLE TODAY

3.1 Cytochrome P450 and Drug Metabolism

  • CYP2D6 Phenotype and Response to Tamoxifen
  • Cytochrome P450 Enzymes and Other Drugs

3.2 Estrogen Receptor and Progesterone Receptor Status and Hormone Therapy for Breast Cancer
3.3 HER2 Overexpression and both Herceptin and Tykerb - Tests for HER2 Overexpression Alone and in Combination with Other Biomarkers
3.4 Multi-Gene/Biomarker Tests for Determining Breast Cancer Prognosis and Treatment

  • Agendia‘s MammaPrint
  • Applied Genomics’ MammoStrat
  • bioTheranostics’ Theros Breast Cancer Index
  • Genomic Health’s Oncotype DX
  • Ipsogen’s MapQuant Dx Genomic Grade

3.5 Multi-Gene/Biomarker Tests for Determining Diagnosis, Prognosis and Treatment of Other Cancers

  • Applied Genomics‘ PulmoType
  • Aureon Laboratories’ Prostate Px
  • bioTheranostics’ Theros CancerTYPE ID
  • Pathwork Diagnostics’ Pathwork Tissue of Origin Test

3.6 Epidermal Growth Factor Receptor (EGFR)

  • Currently Available Therapies That Target EGFR
  • Testing for Expression of EGFR
  • Testing for EGFR Mutations
  • DxS (now part of Qiagen)
  • Genzyme Genetics
  • AutoGenomics

3.7 KRAS Mutations and Anti-EGFR Therapy for Colorectal Cancer
3.8 BRAF Mutations and Anti-EGFR Therapy for Colorectal Cancer
3.9 UGT1A1 Genetic Variants and Treatment with Camptosar (irinotecan)

  • Hologic
  • AutoGenomics 

3.10 DPYD and TYMS Variants and 5-Flurouracil Therapy

  • Myriad Genetics
  • AutoGenomics
  • Others

3.11 Biomarkers in Leukemia and Lymphoma

  • Gleevec and Other Tyrosine Kinase Inhibitors for Treatment of Philadelphia Chromosome Positive CML
  • Philadelphia Chromosome and Busulfan
  • PML/RAR and Vesanoid (tretinoin)
  • Rituxan and Other Antibodies That Target CD20 Antigen for Treatment of Lymphoma or Leukemia
  • Many Additional Biomarkers for Leukemia and Lymphoma

3.12 Personalized Medicine and HIV Therapy - Moving Beyond HIV Viral Load and Drug Resistance Testing

  • HLA-B*5701 Testing and Hypersensitivity to Abacavir
  • CCR5-Tropic HIV and Selzentry (maraviroc)

3.13 CYP2C9 and VKORC1 Variants and Warfarin Dosing
3.14 Thiopurine Methyltransferase and Metabolism of Thiopurine Drugs
3.15 Selected CNS Applications of Personalized Medicine

  • HLA-B*1502 and Carbamazepine
  • PGxPredict:CLOZAPINE

3.16 Selected Other Personalized Medicine Tests

CHAPTER 4
DEVELOPMENT OF DRUG/DIAGNOSTIC COMBINATIONS - PERSONALIZED MEDICINE PRODUCTS

4.1 Identification of Personalized Medicine Biomarkers
4.2 Validation of Diagnostic Tests for Personalized Medicine
4.3 Development and Regulatory Issues Facing Diagnostic Companies in Personalized Medicine

  • Regulatory Issues and Consideration for Clinical Laboratories with Laboratory Developed Tests for Personalized Medicine
  • Regulatory Issues and Consideration for Diagnostics Companies in Personalized Medicine
  • The two basic review processes

4.4 Development and Regulatory Issues Facing Therapeutic Companies in Personalized Medicine
4.5 Selected Personalized Medicine Examples - What Tests are Used by Physicians?

  • Why Isn’t Warfarin Sensitivity Testing Performed Routinely Now?
  • Screening for HLA-B*5701 Hypersensitivity to Abacavir
  • Genomic Health and Validation of OncoType DX
  • Agendia and Validation of MammaPrint

CHAPTER 5
STRATEGIC ISSUES FACING PHARMACEUTICAL AND DIAGNOSTIC COMPANIES DEVELOPING PERSONALIZED MEDICINE PRODUCTS

5.1 Need for More Research and Understanding

  • Biomarkers and Other Factors Influencing Response to Therapy
  • Validation Studies and Outcome Studies
  • Other Research and Information Needs

5.2 Models/Options for Pharmaceutical Companies Developing Drug/Diagnostic Combinations
5.3 Models/Options for Diagnostic Companies Developing Personalized Medicine Tests - Test Development
5.4 Delivery of New Diagnostic Tests - IVD versus CLIA Laboratory
5.5 Health Economics, Reimbursement, and the Payers’ Perspective

  • Health Economic Studies for Personalized Medicine Tests
  • Perspectives Expressed in Expert Interviews
  • Payer Perspectives and Policies
  • Medco Health Solutions
  • Generation Health

5.6 Intellectual Property Issues
5.7 Penetrating the Market

  • Does the Test Affect Physicians’ Decisions?
  • Acceptance by Experts; Incorporation into Guidelines
  • Physician Education


CHAPTER 6
COMPANY PERSPECTIVES ON PERSONALIZED MEDICINE

6.1 Potential Benefits, Risks, and Challenges for Biopharmaceutical and Pharmaceutical Companies
6.2 Potential Benefits, Risks, and Challenges for Diagnostic Companies

CHAPTER 7
POTENTIAL OPPORTUNITIES FOR THE FUTURE

7.1 Tests in Development for Prediction of Breast Cancer Prognosis and Determining Treatment

  • Agendia
  • Applied Genomics (Subsidiary of Clarient)
  • Celera
  • Genomic Health
  • Nuvera Biosciences
  • Prediction Sciences and Clarient
  • Additional Tests in Development for Prediction of Breast Cancer Prognosis and Determining Treatment

7.2 Tests in Development for Determining Prognosis and Treatment of Other Cancers

  • Agendia
  • Applied Genomics (Subsidiary of Clarient)
  • Genomic Health
  • Additional Tests in Development for Prediction of Prognosis and Determining Treatment for Other (Non-Breast) Cancers

7.3 Other (Non-Cancer) Personalized Medicine Tests in Development and/or Used in Pharmaceutical Research
7.4 Pharmaceutical/Diagnostic Company Agreements

CHAPTER 8
EXPERT INTERVIEWS

  • Howard C. Coleman, Chief Executive Officer, Genelex Corporation
  • Cornelius Diamond, CEO, Prediction Sciences
  • Richard Ding, Chief Executive Officer and bioTheranostics (A bioMerieux Company) & Vice President of Strategy and Business Development at bioMerieux (the parent company)
  • Stephen Eck, M.D., Ph.D., Vice President, Translational Medicine & Pharmacogenomics, Eli Lilly
  • Paul Harkin, President & Managing Director, Almac Diagnostics
  • Fareed Kureshym, Founder, Chairman, President and CEO, AutoGenomics
  • Stephen Little, Vice President of Personalized Medicine, Qiagen, Former CEO and Founder of DxS (which was acquired by Qiagen)

Table 3.1:  Valid Genomic Biomarkers in the Context of Approved Drug Labels 14
Table 3.2:  Selected Companies Marketing Tests or Reagents for Detection of Genetic Variants of Cytochrome P450 [Not Including Warfarin Tests] 29
Table 3.3:  Cytochrome P450 Drug Interaction Table - Clinically Relevant Drugs 34
Table 3.4:  Selected Companies Marketing Tests or Reagents for Estrogen Receptor (ER) and Progesterone Receptor (PR) of Breast Tumor Tissue 40
Table 3.5:  Selected Companies Marketing Tests or Reagents for Detection of HER2Overexpression 46
Table 3.6:  Selected Companies Marketing Multi-Gene Tests for Determination of Breast Cancer Prognosis and Treatment 50
Table 3.7:  Selected Companies Marketing Multi-Gene Tests for Other Cancers (Besides Breast Cancer) 56
Table 3.8:  Selected Companies Marketing Tests for Determination of Over-Expression of Epidermal Growth Factor Receptor (EGFR) 62
Table 3.9:  Selected Companies Marketing Tests for Determination of KRAS Variants 67
Table 3.10:  Selected Companies Marketing Tests for Determination of BRAF 70
Table 3.11:  Selected Companies Marketing Tests for Determination of UGT1A1 Variants 72
Table 3.12:  Selected Companies Marketing Tests for Determination of DPYD and TYMS variants 73
Table 3.13:  Selected Companies Marketing Tests for Biomarkers of Leukemia and Lymphoma 76
Table 3.14:  Selected Companies Marketing Tests for Determination of Variants of the CYP2C9 and VKORC1 genes for Warfarin Sensitivity Testing 101
Table 3.15:  Selected Companies Marketing Tests for Determination of Thiopurine Methyltransferase (TPMT) Mutations or Activity 104
Table 3.16:  Selected Companies Marketing Personalized Medicine Tests for CNS Applications 105
Table 3.17:  Selected Companies Marketing Other Personalized Medicine Drug/Diagnostic Combination Tests 108
Table 7-1:  Research Programs and Diagnostic Tests in Development for Cancer Personalized Medicine 154
Table 7-2:  Research Programs and Diagnostic Tests in Development for Other (Non-Cancer) Personalized Medicine, Plus Programs for Unspecified Disease Indications 171
Table 7.3:  Selected Agreements Between Pharmaceutical/Biopharmaceutical Companies and Diagnostic Companies in Personalized Medicine 179
Commonly Available Pharmacogenetic Tests 188

Published By: CHI Healthtech
Product Code: CHI Healthtech1001


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